Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CNOT4O95628 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CNOT4O95628 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CNOT4O95628 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
CNOT4O95628 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CNOT4O95628 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.29□□□□□ -0.12
CNOT4O95628 IGHV3-42-201ENST00000520410 361 ntBASIC14.29□□□□□ -0.12
CNOT4O95628 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CNOT4O95628 PAM16-215ENST00000577031 548 ntTSL 4 BASIC14.29□□□□□ -0.12
CNOT4O95628 YTHDF3-AS1-201ENST00000603538 718 ntBASIC14.29□□□□□ -0.12
CNOT4O95628 RN7SL828P-201ENST00000607615 303 ntBASIC14.29□□□□□ -0.12
CNOT4O95628 AC073592.8-201ENST00000624126 511 ntBASIC14.29□□□□□ -0.12
CNOT4O95628 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
CNOT4O95628 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC14.29□□□□□ -0.12
CNOT4O95628 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
CNOT4O95628 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.29□□□□□ -0.12
CNOT4O95628 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
CNOT4O95628 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC14.29□□□□□ -0.12
CNOT4O95628 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.29□□□□□ -0.12
CNOT4O95628 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 CETN4P-206ENST00000642099 2168 ntBASIC14.29□□□□□ -0.12
CNOT4O95628 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.29□□□□□ -0.12
CNOT4O95628 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.29□□□□□ -0.12
CNOT4O95628 FLJ38576-201ENST00000623820 2459 ntBASIC14.29□□□□□ -0.12
CNOT4O95628 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
CNOT4O95628 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.28□□□□□ -0.12
CNOT4O95628 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 AC008741.2-201ENST00000612792 3115 ntBASIC14.28□□□□□ -0.12
CNOT4O95628 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CNOT4O95628 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
CNOT4O95628 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT4O95628 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT4O95628 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT4O95628 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
CNOT4O95628 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT4O95628 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC14.28□□□□□ -0.12
CNOT4O95628 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.28□□□□□ -0.12
CNOT4O95628 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC14.28□□□□□ -0.12
CNOT4O95628 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
CNOT4O95628 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
CNOT4O95628 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
CNOT4O95628 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms