Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 OARD1-204ENST00000464633 717 ntTSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 AC005740.2-201ENST00000511085 419 ntBASIC23.5■■□□□ 1.35
RAPGEF3O95398 AP003171.2-201ENST00000528208 925 ntBASIC23.5■■□□□ 1.35
RAPGEF3O95398 AL161670.2-201ENST00000557650 1227 ntBASIC23.5■■□□□ 1.35
RAPGEF3O95398 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC23.5■■□□□ 1.35
RAPGEF3O95398 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
RAPGEF3O95398 AC141586.5-201ENST00000624546 2050 ntBASIC23.5■■□□□ 1.35
RAPGEF3O95398 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 AC234644.1-201ENST00000406065 370 ntBASIC23.49■■□□□ 1.35
RAPGEF3O95398 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 AC073413.1-201ENST00000603927 732 ntBASIC23.49■■□□□ 1.35
RAPGEF3O95398 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 ENPP7P14-201ENST00000621765 1040 ntBASIC23.49■■□□□ 1.35
RAPGEF3O95398 AP001002.3-201ENST00000623482 206 ntBASIC23.49■■□□□ 1.35
RAPGEF3O95398 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
RAPGEF3O95398 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
RAPGEF3O95398 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF3O95398 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF3O95398 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF3O95398 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF3O95398 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 FAM8A4P-201ENST00000435433 1213 ntBASIC23.48■■□□□ 1.35
RAPGEF3O95398 FGFR3P1-201ENST00000449999 601 ntBASIC23.48■■□□□ 1.35
RAPGEF3O95398 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 AC100757.4-201ENST00000626934 759 ntBASIC23.48■■□□□ 1.35
RAPGEF3O95398 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF3O95398 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
RAPGEF3O95398 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC23.48■■□□□ 1.35
RAPGEF3O95398 UBALD1-205ENST00000590891 2641 ntBASIC23.47■■□□□ 1.35
RAPGEF3O95398 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 SST-201ENST00000287641 618 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 RGS5-214ENST00000429865 754 ntTSL 3 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 AC114812.1-204ENST00000449669 728 ntBASIC23.47■■□□□ 1.35
RAPGEF3O95398 CEP164P1-201ENST00000455142 418 ntBASIC23.47■■□□□ 1.35
RAPGEF3O95398 NCK2-206ENST00000522586 490 ntTSL 5 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 AC135983.4-201ENST00000564116 1262 ntBASIC23.47■■□□□ 1.35
RAPGEF3O95398 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
RAPGEF3O95398 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC23.47■■□□□ 1.35
RAPGEF3O95398 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF3O95398 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF3O95398 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF3O95398 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF3O95398 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
RAPGEF3O95398 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC23.46■■□□□ 1.35
RAPGEF3O95398 AL354877.1-201ENST00000424412 413 ntBASIC23.46■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms