Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC16.14■□□□□ 0.17
GPC4O75487 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.14■□□□□ 0.17
GPC4O75487 AC243562.1-201ENST00000560672 389 ntBASIC16.14■□□□□ 0.17
GPC4O75487 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
GPC4O75487 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
GPC4O75487 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.14■□□□□ 0.17
GPC4O75487 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
GPC4O75487 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.13■□□□□ 0.17
GPC4O75487 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
GPC4O75487 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
GPC4O75487 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 CD82-202ENST00000342935 967 ntTSL 5 BASIC16.13■□□□□ 0.17
GPC4O75487 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.13■□□□□ 0.17
GPC4O75487 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
GPC4O75487 AC073389.1-201ENST00000595595 795 ntBASIC16.13■□□□□ 0.17
GPC4O75487 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.13■□□□□ 0.17
GPC4O75487 AC026120.1-201ENST00000611536 926 ntBASIC16.13■□□□□ 0.17
GPC4O75487 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
GPC4O75487 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC16.13■□□□□ 0.17
GPC4O75487 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.13■□□□□ 0.17
GPC4O75487 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GPC4O75487 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
GPC4O75487 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
GPC4O75487 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.13■□□□□ 0.17
GPC4O75487 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
GPC4O75487 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 DBET-201ENST00000630918 3363 ntBASIC16.12■□□□□ 0.17
GPC4O75487 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.12■□□□□ 0.17
GPC4O75487 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 RN7SL589P-201ENST00000481268 310 ntBASIC16.12■□□□□ 0.17
GPC4O75487 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC16.12■□□□□ 0.17
GPC4O75487 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
GPC4O75487 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
GPC4O75487 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms