Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC6.98□□□□□ -1.29
USH2AO75445 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC6.98□□□□□ -1.29
USH2AO75445 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
USH2AO75445 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC6.98□□□□□ -1.29
USH2AO75445 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC6.98□□□□□ -1.29
USH2AO75445 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC6.98□□□□□ -1.29
USH2AO75445 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 GHSR-202ENST00000427970 912 ntBASIC6.97□□□□□ -1.29
USH2AO75445 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC6.97□□□□□ -1.29
USH2AO75445 AC005740.2-201ENST00000511085 419 ntBASIC6.97□□□□□ -1.29
USH2AO75445 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 ZNF385A-213ENST00000551771 1111 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 AC073413.1-201ENST00000603927 732 ntBASIC6.97□□□□□ -1.29
USH2AO75445 AP005019.2-201ENST00000615104 511 ntBASIC6.97□□□□□ -1.29
USH2AO75445 AL132780.4-201ENST00000624870 1135 ntBASIC6.97□□□□□ -1.29
USH2AO75445 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 CCDC167-201ENST00000373408 619 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 RGS5-214ENST00000429865 754 ntTSL 3 BASIC6.97□□□□□ -1.29
USH2AO75445 MIR503HG-202ENST00000440570 760 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC6.97□□□□□ -1.29
USH2AO75445 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 AL353622.2-201ENST00000605846 425 ntBASIC6.97□□□□□ -1.29
USH2AO75445 MIR6125-201ENST00000618986 96 ntBASIC6.97□□□□□ -1.29
USH2AO75445 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
USH2AO75445 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 AC093909.3-201ENST00000504783 336 ntBASIC6.97□□□□□ -1.29
USH2AO75445 SLED1-202ENST00000512051 380 ntBASIC6.97□□□□□ -1.29
USH2AO75445 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC6.97□□□□□ -1.29
USH2AO75445 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC6.97□□□□□ -1.29
USH2AO75445 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 SLC16A6P1-201ENST00000413214 1059 ntBASIC6.97□□□□□ -1.29
USH2AO75445 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC6.97□□□□□ -1.29
USH2AO75445 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
USH2AO75445 GRN-214ENST00000589265 1632 ntTSL 5 BASIC6.97□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms