Protein–RNA interactions for Protein: O43405

COCH, Cochlin, humanhuman

Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COCHO43405 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 AC069224.1-201ENST00000566372 1715 ntBASIC16.45■□□□□ 0.22
COCHO43405 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.45■□□□□ 0.22
COCHO43405 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.45■□□□□ 0.22
COCHO43405 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC16.45■□□□□ 0.22
COCHO43405 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 AC104596.2-201ENST00000512793 793 ntBASIC16.45■□□□□ 0.22
COCHO43405 PUDP-206ENST00000540122 825 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 AC036164.1-201ENST00000570544 333 ntBASIC16.45■□□□□ 0.22
COCHO43405 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.45■□□□□ 0.22
COCHO43405 AC132938.2-201ENST00000579188 680 ntBASIC16.45■□□□□ 0.22
COCHO43405 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 WFDC1-204ENST00000613603 549 ntBASIC16.45■□□□□ 0.22
COCHO43405 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC16.45■□□□□ 0.22
COCHO43405 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC16.45■□□□□ 0.22
COCHO43405 AL591163.1-201ENST00000641757 987 ntBASIC16.45■□□□□ 0.22
COCHO43405 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
COCHO43405 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
COCHO43405 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
COCHO43405 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
COCHO43405 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
COCHO43405 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
COCHO43405 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.44■□□□□ 0.22
COCHO43405 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 AL512384.1-201ENST00000406683 331 ntBASIC16.44■□□□□ 0.22
COCHO43405 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 NAA50-208ENST00000497255 789 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 AC011495.1-201ENST00000498085 584 ntBASIC16.44■□□□□ 0.22
COCHO43405 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 AC092552.1-201ENST00000547243 906 ntBASIC16.44■□□□□ 0.22
COCHO43405 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
COCHO43405 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.44■□□□□ 0.22
COCHO43405 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
COCHO43405 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
COCHO43405 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
COCHO43405 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
COCHO43405 AC124067.4-201ENST00000519691 2379 ntBASIC16.43■□□□□ 0.22
COCHO43405 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.43■□□□□ 0.22
COCHO43405 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
COCHO43405 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
COCHO43405 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
COCHO43405 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.43■□□□□ 0.22
COCHO43405 GK-202ENST00000378941 458 ntTSL 3 BASIC16.43■□□□□ 0.22
COCHO43405 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms