Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC16.61■□□□□ 0.25
MSI1O43347 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.61■□□□□ 0.25
MSI1O43347 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC16.61■□□□□ 0.25
MSI1O43347 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.61■□□□□ 0.25
MSI1O43347 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 AC004790.1-201ENST00000612686 536 ntBASIC16.61■□□□□ 0.25
MSI1O43347 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MSI1O43347 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MSI1O43347 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MSI1O43347 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
MSI1O43347 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC16.6■□□□□ 0.25
MSI1O43347 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 FO393414.2-201ENST00000405153 598 ntBASIC16.6■□□□□ 0.25
MSI1O43347 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.6■□□□□ 0.25
MSI1O43347 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.6■□□□□ 0.25
MSI1O43347 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.6■□□□□ 0.25
MSI1O43347 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.6■□□□□ 0.25
MSI1O43347 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 AC135586.1-201ENST00000539323 574 ntBASIC16.6■□□□□ 0.25
MSI1O43347 SUOX-214ENST00000551841 906 ntTSL 3 BASIC16.6■□□□□ 0.25
MSI1O43347 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.6■□□□□ 0.25
MSI1O43347 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC16.6■□□□□ 0.25
MSI1O43347 MIR3197-201ENST00000582241 73 ntBASIC16.6■□□□□ 0.25
MSI1O43347 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC16.6■□□□□ 0.25
MSI1O43347 AC025048.3-201ENST00000590609 569 ntBASIC16.6■□□□□ 0.25
MSI1O43347 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.6■□□□□ 0.25
MSI1O43347 LINC02560-201ENST00000596379 459 ntBASIC16.6■□□□□ 0.25
MSI1O43347 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 AC005702.4-201ENST00000618393 416 ntBASIC16.6■□□□□ 0.25
MSI1O43347 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.6■□□□□ 0.25
MSI1O43347 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.6■□□□□ 0.25
MSI1O43347 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.6■□□□□ 0.25
MSI1O43347 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
MSI1O43347 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
MSI1O43347 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
MSI1O43347 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.59■□□□□ 0.25
MSI1O43347 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
MSI1O43347 ANKRD26P3-201ENST00000454044 2748 ntBASIC16.59■□□□□ 0.25
MSI1O43347 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
MSI1O43347 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms