Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.36■□□□□ 0.05
PDLIM1O00151 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.36■□□□□ 0.05
PDLIM1O00151 AC148477.8-201ENST00000624298 468 ntBASIC15.36■□□□□ 0.05
PDLIM1O00151 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.36■□□□□ 0.05
PDLIM1O00151 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC15.36■□□□□ 0.05
PDLIM1O00151 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 TOP3BP1-201ENST00000420768 1380 ntBASIC15.36■□□□□ 0.05
PDLIM1O00151 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.36■□□□□ 0.05
PDLIM1O00151 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PDLIM1O00151 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 AC068587.6-202ENST00000641839 5619 ntBASIC15.35■□□□□ 0.05
PDLIM1O00151 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM1O00151 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 MECR-202ENST00000373791 2416 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM1O00151 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM1O00151 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM1O00151 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 BX005266.1-201ENST00000473402 457 ntBASIC15.35■□□□□ 0.05
PDLIM1O00151 AC073648.2-201ENST00000510116 352 ntBASIC15.35■□□□□ 0.05
PDLIM1O00151 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 KLK8-205ENST00000593490 267 ntTSL 3 BASIC15.35■□□□□ 0.05
PDLIM1O00151 MTDHP4-201ENST00000600287 670 ntBASIC15.35■□□□□ 0.05
PDLIM1O00151 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
PDLIM1O00151 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC15.35■□□□□ 0.05
PDLIM1O00151 KCNN2-206ENST00000512097 3076 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
PDLIM1O00151 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PDLIM1O00151 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 AC232323.1-201ENST00000540724 2099 ntBASIC15.34■□□□□ 0.05
PDLIM1O00151 REXO1L5P-201ENST00000622260 2098 ntBASIC15.34■□□□□ 0.05
PDLIM1O00151 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 AC067930.6-201ENST00000623257 4947 ntBASIC15.34■□□□□ 0.05
PDLIM1O00151 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 HNRNPDP1-201ENST00000439535 754 ntBASIC15.34■□□□□ 0.05
PDLIM1O00151 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.34■□□□□ 0.05
PDLIM1O00151 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.34■□□□□ 0.05
PDLIM1O00151 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.34■□□□□ 0.05
PDLIM1O00151 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PDLIM1O00151 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.34■□□□□ 0.05
PDLIM1O00151 MIR4492-201ENST00000581627 80 ntBASIC15.34■□□□□ 0.05
PDLIM1O00151 AC010654.1-201ENST00000615722 808 ntBASIC15.34■□□□□ 0.05
PDLIM1O00151 AL773604.1-201ENST00000617417 272 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms