Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC8.87□□□□□ -0.99
CHKB-CPT1BH3BT56 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 MYO18B-205ENST00000536101 8051 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CCDC144B-208ENST00000618081 8688 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 LVRN-201ENST00000357872 4581 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CYP51A1P1-201ENST00000492267 1507 ntBASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 POR-201ENST00000394893 2532 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 NFIA-207ENST00000403491 9487 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PDIK1L-204ENST00000619836 4252 ntAPPRIS P1 TSL 3 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 UQCRFS1P1-201ENST00000435169 820 ntBASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 RARRES2P1-201ENST00000474487 481 ntBASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 GLRB-205ENST00000512619 728 ntTSL 3 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 AC008687.5-201ENST00000593746 558 ntBASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 BID-214ENST00000617586 542 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PLEC-201ENST00000322810 15249 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TXLNA-202ENST00000373610 4854 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 CRY2-212ENST00000616623 4204 ntAPPRIS P2 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 RFWD3-201ENST00000361070 4957 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TMEM132D-201ENST00000389441 5305 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC8.86□□□□□ -0.99
CHKB-CPT1BH3BT56 UGGT2-203ENST00000376747 4832 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
CHKB-CPT1BH3BT56 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms