Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 AC025062.2-201ENST00000605477 670 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 AC006504.4-201ENST00000592118 1568 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 PCGF3-213ENST00000620529 1899 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 AL603832.2-201ENST00000566195 2125 ntBASIC17.47■□□□□ 0.39
CCDC66A2RUB6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC66A2RUB6 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC026396.1-201ENST00000419388 421 ntBASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC107918.2-201ENST00000530817 355 ntBASIC17.46■□□□□ 0.39
CCDC66A2RUB6 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC091304.2-201ENST00000564639 760 ntBASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AP001350.2-201ENST00000625104 1094 ntBASIC17.46■□□□□ 0.39
CCDC66A2RUB6 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC66A2RUB6 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC66A2RUB6 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC66A2RUB6 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 AC107918.4-201ENST00000641966 3141 ntBASIC17.45■□□□□ 0.38
CCDC66A2RUB6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 DFFB-203ENST00000341385 572 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 AC087641.1-201ENST00000557561 1021 ntBASIC17.45■□□□□ 0.38
CCDC66A2RUB6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 CLEC4GP1-201ENST00000596555 870 ntBASIC17.45■□□□□ 0.38
CCDC66A2RUB6 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 GGTLC5P-201ENST00000617623 998 ntBASIC17.45■□□□□ 0.38
CCDC66A2RUB6 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC66A2RUB6 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms