Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
HFM1A2PYH4 TEX30-203ENST00000376022 828 ntTSL 2 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
HFM1A2PYH4 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 AC008735.3-201ENST00000596646 500 ntBASIC23.33■■□□□ 1.32
HFM1A2PYH4 AC010319.3-201ENST00000597028 470 ntBASIC23.33■■□□□ 1.32
HFM1A2PYH4 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC23.33■■□□□ 1.32
HFM1A2PYH4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 KRT8P22-201ENST00000562317 1415 ntBASIC23.32■■□□□ 1.32
HFM1A2PYH4 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 AGER-206ENST00000375070 1463 ntTSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 TTTY23B-201ENST00000442790 549 ntBASIC23.32■■□□□ 1.32
HFM1A2PYH4 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC23.32■■□□□ 1.32
HFM1A2PYH4 AC005252.2-201ENST00000624630 1141 ntBASIC23.32■■□□□ 1.32
HFM1A2PYH4 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HFM1A2PYH4 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 SOCS2P1-201ENST00000417727 557 ntBASIC23.31■■□□□ 1.32
HFM1A2PYH4 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 SERF2-217ENST00000630046 862 ntTSL 5 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
HFM1A2PYH4 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC23.31■■□□□ 1.32
HFM1A2PYH4 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 PGF-202ENST00000405431 666 ntTSL 5 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
HFM1A2PYH4 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 ABBA01031660.1-201ENST00000635219 756 ntBASIC23.3■■□□□ 1.32
HFM1A2PYH4 AL033527.5-201ENST00000641382 801 ntBASIC23.3■■□□□ 1.32
HFM1A2PYH4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
HFM1A2PYH4 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms