Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 CNN2P3-201ENST00000450201 906 ntBASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 AC069262.1-201ENST00000539058 672 ntBASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 REXO1L8P-201ENST00000604378 1897 ntBASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 AC018529.1-201ENST00000613063 361 ntBASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 AL136317.3-201ENST00000618497 906 ntBASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 MTHFR-217ENST00000641820 1569 ntBASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
RPH3AQ9Y2J0 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 KLK8-202ENST00000320838 456 ntTSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
RPH3AQ9Y2J0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC14.77□□□□□ -0.04
RPH3AQ9Y2J0 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 FAM220BP-201ENST00000377689 816 ntBASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 AC125807.1-201ENST00000483097 614 ntBASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.77□□□□□ -0.05
RPH3AQ9Y2J0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms