Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NINLQ9Y2I6 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC21.72■■□□□ 1.07
NINLQ9Y2I6 AL121723.1-201ENST00000445194 1519 ntBASIC21.72■■□□□ 1.07
NINLQ9Y2I6 CYP2AB1P-202ENST00000454440 1456 ntBASIC21.71■■□□□ 1.07
NINLQ9Y2I6 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 RERG-209ENST00000546331 1383 ntTSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 AL133267.1-201ENST00000398220 340 ntBASIC21.71■■□□□ 1.07
NINLQ9Y2I6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NINLQ9Y2I6 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.07
NINLQ9Y2I6 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NINLQ9Y2I6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
NINLQ9Y2I6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 AL049840.4-201ENST00000602422 811 ntBASIC21.7■■□□□ 1.06
NINLQ9Y2I6 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 MIR6787-201ENST00000616675 61 ntBASIC21.7■■□□□ 1.06
NINLQ9Y2I6 AL033527.5-201ENST00000641382 801 ntBASIC21.7■■□□□ 1.06
NINLQ9Y2I6 CYP2T1P-202ENST00000641596 2535 ntBASIC21.7■■□□□ 1.06
NINLQ9Y2I6 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC21.7■■□□□ 1.06
NINLQ9Y2I6 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC21.69■■□□□ 1.06
NINLQ9Y2I6 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms