Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SORCS3Q9UPU3 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SORCS3Q9UPU3 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SORCS3Q9UPU3 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC16.9■□□□□ 0.3
SORCS3Q9UPU3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.9■□□□□ 0.3
SORCS3Q9UPU3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC16.89■□□□□ 0.3
SORCS3Q9UPU3 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.89■□□□□ 0.3
SORCS3Q9UPU3 CES3-203ENST00000543856 3178 ntTSL 2 BASIC16.89■□□□□ 0.3
SORCS3Q9UPU3 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC008741.2-201ENST00000612792 3115 ntBASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC092933.1-201ENST00000393644 945 ntBASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SORCS3Q9UPU3 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 BCYRN1-201ENST00000418539 200 ntBASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 KRT43P-201ENST00000434019 910 ntBASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 WFDC1-204ENST00000613603 549 ntBASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 KRT8P12-202ENST00000472924 1397 ntBASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
SORCS3Q9UPU3 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.87■□□□□ 0.29
SORCS3Q9UPU3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SORCS3Q9UPU3 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SORCS3Q9UPU3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.87■□□□□ 0.29
SORCS3Q9UPU3 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SORCS3Q9UPU3 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms