Protein–RNA interactions for Protein: Q9UPQ9

TNRC6B, Trinucleotide repeat-containing gene 6B protein, humanhuman

Known RBP Predictions only

Length 1,833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6BQ9UPQ9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 SUN1-204ENST00000403868 978 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 FAM8A4P-201ENST00000435433 1213 ntBASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 TMEM198B-204ENST00000484016 896 ntBASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 AC022217.1-201ENST00000521069 738 ntBASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 LINC01229-204ENST00000568751 720 ntTSL 3 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.03
TNRC6BQ9UPQ9 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 AC006449.6-201ENST00000612330 2296 ntBASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 NFYC-202ENST00000372651 1202 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 AL662890.1-201ENST00000396818 632 ntBASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 GGCT-203ENST00000409144 836 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 GHSR-202ENST00000427970 912 ntBASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 FOS-206ENST00000555347 1280 ntTSL 2 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TNRC6BQ9UPQ9 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AC018892.3-201ENST00000623986 2499 ntBASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 NKAIN1P1-201ENST00000435754 582 ntBASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
TNRC6BQ9UPQ9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 AC104457.1-201ENST00000401024 814 ntBASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 IMP3P2-201ENST00000489760 475 ntBASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 BX539320.1-201ENST00000623759 877 ntBASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.24■□□□□ 0.03
TNRC6BQ9UPQ9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms