Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CDH9Q9ULB4 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 CDC14C-201ENST00000428251 1719 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AC074338.1-201ENST00000416825 156 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 MEP1AP4-201ENST00000423244 1087 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 RPL13P2-201ENST00000440687 659 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AL589987.1-201ENST00000453380 819 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 TPRX2P-201ENST00000535362 881 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 SPDYE22P-201ENST00000582158 798 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 AC097359.3-201ENST00000603982 1210 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 LINC01115-203ENST00000606068 577 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 LINC02447-202ENST00000501888 2146 ntBASIC16.87■□□□□ 0.29
CDH9Q9ULB4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CDH9Q9ULB4 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.86■□□□□ 0.29
CDH9Q9ULB4 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 BLK-205ENST00000529894 2017 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 MEIS3P1-201ENST00000495167 958 ntBASIC16.86■□□□□ 0.29
CDH9Q9ULB4 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 AL662799.1-202ENST00000614205 422 ntBASIC16.86■□□□□ 0.29
CDH9Q9ULB4 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CDH9Q9ULB4 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms