Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 SPDYE7P-202ENST00000420373 878 ntBASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AC015911.4-201ENST00000588022 1070 ntBASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AC018529.1-201ENST00000613063 361 ntBASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
PPARGC1AQ9UBK2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AC069262.1-201ENST00000539058 672 ntBASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AC025678.2-201ENST00000562061 970 ntBASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.75■□□□□ 0.27
PPARGC1AQ9UBK2 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 MST1L-201ENST00000442552 2185 ntBASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 SLC9A7P1-201ENST00000554295 3311 ntBASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 MAX-210ENST00000555419 765 ntTSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PPARGC1AQ9UBK2 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms