Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 AC239800.4-201ENST00000603712 296 ntBASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CLCF1Q9UBD9 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 SLC7A15P-201ENST00000424028 1363 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 MIR648-201ENST00000385046 94 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AC087499.6-201ENST00000411576 835 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AC005034.1-201ENST00000426657 489 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 RN7SL692P-201ENST00000464677 288 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 CD81-207ENST00000481687 890 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AC055876.2-201ENST00000531834 546 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 TPRX2P-201ENST00000535362 881 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AL596325.1-201ENST00000563991 1082 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AL035252.4-201ENST00000624174 288 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AC134407.2-201ENST00000625089 1978 ntBASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CLCF1Q9UBD9 AC008894.3-201ENST00000624324 3103 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 MEP1AP4-201ENST00000423244 1087 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 GAPDHP21-201ENST00000450301 1010 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AC023310.3-201ENST00000557027 670 ntBASIC14.21□□□□□ -0.13
CLCF1Q9UBD9 AC100756.1-201ENST00000562736 682 ntBASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms