Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 LRRFIP1P1-201ENST00000498774 2246 ntBASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 RN7SL48P-201ENST00000579283 293 ntBASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 AC104982.3-201ENST00000581995 514 ntBASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
SLC52A1Q9NWF4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 ALOX12P2-203ENST00000570921 1945 ntBASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 AL590640.2-201ENST00000457038 527 ntBASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 CYGB-203ENST00000589145 788 ntTSL 3 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 AL021578.1-201ENST00000613646 709 ntBASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
SLC52A1Q9NWF4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 ACTG1P17-201ENST00000558391 1119 ntBASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 RN7SL190P-201ENST00000582519 257 ntBASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 TBCB-211ENST00000589996 724 ntTSL 3 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC22.54■■□□□ 1.2
SLC52A1Q9NWF4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 MIR648-201ENST00000385046 94 ntBASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 KRTAP10-13P-201ENST00000412914 571 ntBASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 AC114812.1-204ENST00000449669 728 ntBASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 NEU3-202ENST00000526068 431 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 EHF-205ENST00000527935 557 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 COG4-212ENST00000564653 590 ntTSL 5 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 UBL5-208ENST00000593087 320 ntTSL 3 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 AL096828.3-201ENST00000615354 462 ntBASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
SLC52A1Q9NWF4 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC22.53■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms