Protein–RNA interactions for Protein: Q9NSC2

SALL1, Sal-like protein 1, humanhuman

Predictions only

Length 1,324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL1Q9NSC2 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 AL442647.2-201ENST00000429864 857 ntBASIC19.17■□□□□ 0.66
SALL1Q9NSC2 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 VILL-207ENST00000465644 1857 ntTSL 5 BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SALL1Q9NSC2 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 BRI3BPP1-201ENST00000594224 787 ntBASIC19.16■□□□□ 0.66
SALL1Q9NSC2 RPSAP52-203ENST00000622976 1023 ntBASIC19.16■□□□□ 0.66
SALL1Q9NSC2 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SALL1Q9NSC2 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 GPR53P-205ENST00000457298 1084 ntBASIC19.15■□□□□ 0.66
SALL1Q9NSC2 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 AC011477.6-201ENST00000604980 1927 ntBASIC19.15■□□□□ 0.66
SALL1Q9NSC2 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
SALL1Q9NSC2 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SALL1Q9NSC2 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC19.14■□□□□ 0.66
SALL1Q9NSC2 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SALL1Q9NSC2 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
SALL1Q9NSC2 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SALL1Q9NSC2 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms