Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 LINC01144-201ENST00000626198 1710 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 MYCLP2-201ENST00000449268 967 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 ELK1P1-201ENST00000485699 580 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AC011495.1-201ENST00000498085 584 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AC092337.1-201ENST00000568699 1129 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PAM16-215ENST00000577031 548 ntTSL 4 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 CTBP2P3-201ENST00000585629 1255 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AC025048.3-201ENST00000590609 569 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 AC005702.4-201ENST00000618393 416 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PCDHA14-201ENST00000506751 2298 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 CYP4F24P-201ENST00000586049 1580 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.59■□□□□ 0.25
HPS4Q9NQG7 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
HPS4Q9NQG7 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 DOC2GP-204ENST00000639052 2548 ntBASIC16.58■□□□□ 0.25
HPS4Q9NQG7 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
HPS4Q9NQG7 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 MEP1AP4-201ENST00000423244 1087 ntBASIC16.58■□□□□ 0.24
HPS4Q9NQG7 RN7SL837P-201ENST00000463010 287 ntBASIC16.58■□□□□ 0.24
HPS4Q9NQG7 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 AC123567.1-201ENST00000548294 1261 ntBASIC16.58■□□□□ 0.24
HPS4Q9NQG7 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
HPS4Q9NQG7 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms