Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 AC026748.1-201ENST00000624349 3251 ntBASIC10.82□□□□□ -0.68
SND1-IT1Q9HBX3 GSN-203ENST00000373808 2664 ntTSL 2 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 GUK1-204ENST00000366721 689 ntTSL 3 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 AC211429.1-201ENST00000415277 523 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 PRYP5-201ENST00000451909 266 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 AP002414.4-201ENST00000589764 1148 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 AC066615.1-201ENST00000640911 628 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 GSN-206ENST00000394353 2311 ntTSL 2 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 CICP24-201ENST00000605464 2705 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 PTENP1-202ENST00000532280 3996 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 AC005332.1-201ENST00000577698 1310 ntBASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
SND1-IT1Q9HBX3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 MDH2-205ENST00000461263 648 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 BX005266.1-201ENST00000473402 457 ntBASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AC104819.1-201ENST00000504587 486 ntBASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC10.8□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms