Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
SLIRPQ9GZT3 AC027612.1-201ENST00000445234 2395 ntBASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 CCS-201ENST00000310190 942 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AL160237.2-201ENST00000556165 472 ntBASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TCAF1P1-201ENST00000414990 2232 ntBASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 AC089987.1-201ENST00000551654 2209 ntBASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
SLIRPQ9GZT3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC127383.1-201ENST00000444697 1800 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC245100.5-201ENST00000452108 331 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC087641.1-201ENST00000557561 1021 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 MIR4651-201ENST00000582622 73 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CGB7-203ENST00000597853 3386 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 AL359881.3-201ENST00000602640 1721 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 FGF14-AS2-201ENST00000606448 1074 ntBASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 GALC-206ENST00000544807 2528 ntTSL 2 BASIC14.11□□□□□ -0.15
SLIRPQ9GZT3 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms