Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PHACTR1Q9C0D0 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 ZBTB45P2-201ENST00000452245 1531 ntBASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 RAC2-202ENST00000401529 569 ntTSL 4 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
PHACTR1Q9C0D0 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 C18orf15-201ENST00000623680 2534 ntBASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 PARN-202ENST00000420015 2360 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AC079781.3-201ENST00000449110 356 ntBASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AC061975.2-201ENST00000581722 295 ntBASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AC024267.1-201ENST00000582320 895 ntBASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 AL773604.1-201ENST00000617417 272 ntBASIC16.28■□□□□ 0.2
PHACTR1Q9C0D0 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms