Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 MIR600HG-201ENST00000449175 5984 ntBASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 TNRC18P2-201ENST00000417666 2714 ntBASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC105250.1-201ENST00000509378 2057 ntBASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
SHANK2-AS3Q9BTD1 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC099063.4-201ENST00000641099 1602 ntBASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC079776.4-201ENST00000511039 504 ntBASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 IGHV3-22-201ENST00000520721 359 ntBASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 RN7SL510P-201ENST00000581311 263 ntBASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AL031008.1-201ENST00000619963 541 ntBASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 HADH-212ENST00000638621 741 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 API5-202ENST00000420461 2009 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
SHANK2-AS3Q9BTD1 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 AC138035.3-201ENST00000622706 2791 ntBASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
SHANK2-AS3Q9BTD1 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms