Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
HDHD3Q9BSH5 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 CRYGEP-201ENST00000412192 528 ntBASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 HCG4B-203ENST00000450128 991 ntBASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 UNC93B6-202ENST00000528242 690 ntBASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 TCAP-202ENST00000578283 583 ntTSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 AC011477.6-201ENST00000604980 1927 ntBASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
HDHD3Q9BSH5 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC009090.5-201ENST00000624886 2285 ntBASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC090616.6-203ENST00000579186 1945 ntBASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 METTL26-205ENST00000397666 726 ntTSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC109635.5-201ENST00000533593 962 ntBASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AL365330.1-201ENST00000607459 531 ntBASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AL589702.1-201ENST00000641229 1509 ntBASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 AC091951.1-201ENST00000512854 2465 ntBASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
HDHD3Q9BSH5 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms