Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 KRT18P31-201ENST00000506277 1292 ntBASIC15.66■□□□□ 0.1
EBF4Q9BQW3 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 AP002469.2-201ENST00000531724 424 ntBASIC15.66■□□□□ 0.1
EBF4Q9BQW3 MIR3909-201ENST00000579518 119 ntBASIC15.66■□□□□ 0.1
EBF4Q9BQW3 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.66■□□□□ 0.1
EBF4Q9BQW3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
EBF4Q9BQW3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 KRT8P44-201ENST00000441609 1350 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AC232323.1-201ENST00000540724 2099 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 REXO1L5P-201ENST00000622260 2098 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AKR1C7P-201ENST00000305623 895 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 RPS2P1-201ENST00000434010 821 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 FAM185BP-201ENST00000443595 716 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 REXO1L6P-202ENST00000619970 1078 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AL390755.1-201ENST00000623716 2027 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 AP001282.1-201ENST00000531301 1499 ntBASIC15.65■□□□□ 0.1
EBF4Q9BQW3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
EBF4Q9BQW3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
EBF4Q9BQW3 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms