Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 AC011477.6-201ENST00000604980 1927 ntBASIC16.27■□□□□ 0.2
SEMA3CQ99985 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 AC067863.1-201ENST00000494933 530 ntBASIC16.27■□□□□ 0.2
SEMA3CQ99985 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 AC051619.7-201ENST00000568314 623 ntBASIC16.27■□□□□ 0.2
SEMA3CQ99985 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.27■□□□□ 0.2
SEMA3CQ99985 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SEMA3CQ99985 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SEMA3CQ99985 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
SEMA3CQ99985 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SEMA3CQ99985 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.27■□□□□ 0.19
SEMA3CQ99985 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.27■□□□□ 0.19
SEMA3CQ99985 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.27■□□□□ 0.19
SEMA3CQ99985 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 PRAL-201ENST00000624952 3286 ntBASIC16.26■□□□□ 0.19
SEMA3CQ99985 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 AC107890.1-201ENST00000422478 521 ntBASIC16.26■□□□□ 0.19
SEMA3CQ99985 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 AL589739.1-201ENST00000607720 493 ntBASIC16.26■□□□□ 0.19
SEMA3CQ99985 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEMA3CQ99985 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.26■□□□□ 0.19
SEMA3CQ99985 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 AC022188.1-201ENST00000620960 1664 ntBASIC16.25■□□□□ 0.19
SEMA3CQ99985 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.25■□□□□ 0.19
SEMA3CQ99985 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 BAD-202ENST00000394531 631 ntTSL 3 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 BAD-207ENST00000544785 525 ntTSL 3 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 AL079307.3-201ENST00000556114 283 ntBASIC16.25■□□□□ 0.19
SEMA3CQ99985 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 KRT8P37-201ENST00000451609 1420 ntBASIC16.25■□□□□ 0.19
SEMA3CQ99985 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SEMA3CQ99985 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC16.25■□□□□ 0.19
SEMA3CQ99985 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3CQ99985 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.24■□□□□ 0.19
SEMA3CQ99985 CETN4P-206ENST00000642099 2168 ntBASIC16.24■□□□□ 0.19
SEMA3CQ99985 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.24■□□□□ 0.19
SEMA3CQ99985 REXO1L1P-202ENST00000608646 1974 ntBASIC16.24■□□□□ 0.19
SEMA3CQ99985 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SEMA3CQ99985 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.24■□□□□ 0.19
SEMA3CQ99985 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms