Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC16.73■□□□□ 0.27
SMOQ99835 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.73■□□□□ 0.27
SMOQ99835 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.73■□□□□ 0.27
SMOQ99835 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
SMOQ99835 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
SMOQ99835 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC16.73■□□□□ 0.27
SMOQ99835 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC16.73■□□□□ 0.27
SMOQ99835 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SMOQ99835 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.73■□□□□ 0.27
SMOQ99835 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SMOQ99835 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.72■□□□□ 0.27
SMOQ99835 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.72■□□□□ 0.27
SMOQ99835 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16.72■□□□□ 0.27
SMOQ99835 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.72■□□□□ 0.27
SMOQ99835 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SMOQ99835 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SMOQ99835 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMOQ99835 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.72■□□□□ 0.27
SMOQ99835 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SMOQ99835 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SMOQ99835 PIN1P1-201ENST00000412108 996 ntBASIC16.72■□□□□ 0.27
SMOQ99835 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC16.72■□□□□ 0.27
SMOQ99835 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.72■□□□□ 0.27
SMOQ99835 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.72■□□□□ 0.27
SMOQ99835 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.72■□□□□ 0.27
SMOQ99835 AC190387.1-201ENST00000551683 408 ntBASIC16.72■□□□□ 0.27
SMOQ99835 AC023310.3-201ENST00000557027 670 ntBASIC16.72■□□□□ 0.27
SMOQ99835 AC100756.1-201ENST00000562736 682 ntBASIC16.72■□□□□ 0.27
SMOQ99835 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.72■□□□□ 0.27
SMOQ99835 AC138749.3-201ENST00000567691 622 ntBASIC16.72■□□□□ 0.27
SMOQ99835 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.72■□□□□ 0.27
SMOQ99835 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 AL132655.2-201ENST00000596276 594 ntBASIC16.72■□□□□ 0.27
SMOQ99835 AC116165.1-201ENST00000611806 668 ntBASIC16.72■□□□□ 0.27
SMOQ99835 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.72■□□□□ 0.27
SMOQ99835 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 AC007541.1-201ENST00000570282 1469 ntBASIC16.72■□□□□ 0.27
SMOQ99835 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SMOQ99835 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SMOQ99835 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.71■□□□□ 0.27
SMOQ99835 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.71■□□□□ 0.27
SMOQ99835 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.71■□□□□ 0.27
SMOQ99835 CRB3P1-201ENST00000449338 276 ntBASIC16.71■□□□□ 0.27
SMOQ99835 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.71■□□□□ 0.27
SMOQ99835 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC16.71■□□□□ 0.27
SMOQ99835 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.71■□□□□ 0.27
SMOQ99835 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
SMOQ99835 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.71■□□□□ 0.27
SMOQ99835 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
SMOQ99835 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
SMOQ99835 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SMOQ99835 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
SMOQ99835 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SMOQ99835 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
SMOQ99835 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
SMOQ99835 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
SMOQ99835 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMOQ99835 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.7■□□□□ 0.26
SMOQ99835 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms