Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 AL035633.1-201ENST00000406139 838 ntBASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 AC087499.6-201ENST00000411576 835 ntBASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 CRB3P1-201ENST00000449338 276 ntBASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 COX20P2-201ENST00000452636 358 ntBASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.6■□□□□ 0.25
CDK5RAP1Q96SZ6 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 CYP2T1P-202ENST00000641596 2535 ntBASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 AL358472.5-202ENST00000641448 1267 ntBASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDK5RAP1Q96SZ6 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CDK5RAP1Q96SZ6 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 SPDYE19P-201ENST00000338590 713 ntBASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 AC136604.1-201ENST00000418535 575 ntBASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 TAF8-206ENST00000472818 719 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 AL132655.2-201ENST00000596276 594 ntBASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 DEK-201ENST00000244776 1441 ntTSL 2 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC16.58■□□□□ 0.24
CDK5RAP1Q96SZ6 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 188.4 ms