Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 FUZ-207ENST00000526575 482 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 BRI3BPP1-201ENST00000594224 787 ntBASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AL162274.1-201ENST00000617191 1098 ntBASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.57■□□□□ 0.56
CCDC17Q96LX7 AC092364.2-201ENST00000596710 2692 ntBASIC18.57■□□□□ 0.56
CCDC17Q96LX7 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 AC007389.4-201ENST00000454674 793 ntBASIC18.56■□□□□ 0.56
CCDC17Q96LX7 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
CCDC17Q96LX7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 TTTY23B-201ENST00000442790 549 ntBASIC18.55■□□□□ 0.56
CCDC17Q96LX7 GPR53P-205ENST00000457298 1084 ntBASIC18.55■□□□□ 0.56
CCDC17Q96LX7 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 RPL13AP25-201ENST00000484130 612 ntBASIC18.55■□□□□ 0.56
CCDC17Q96LX7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 AC133539.2-201ENST00000604757 467 ntBASIC18.55■□□□□ 0.56
CCDC17Q96LX7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 AC018892.3-201ENST00000623986 2499 ntBASIC18.55■□□□□ 0.56
CCDC17Q96LX7 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.55■□□□□ 0.56
CCDC17Q96LX7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 AMT-232ENST00000636199 1546 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CCDC17Q96LX7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms