Protein–RNA interactions for Protein: Q96JS3

PGBD1, PiggyBac transposable element-derived protein 1, humanhuman

Predictions only

Length 809 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD1Q96JS3 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 FAM86GP-201ENST00000448322 971 ntBASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 AC018529.1-201ENST00000613063 361 ntBASIC18.62■□□□□ 0.57
PGBD1Q96JS3 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 TUBB3P1-201ENST00000405796 1332 ntBASIC18.62■□□□□ 0.57
PGBD1Q96JS3 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
PGBD1Q96JS3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC18.61■□□□□ 0.57
PGBD1Q96JS3 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 AC092850.2-201ENST00000623821 2697 ntBASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.61■□□□□ 0.57
PGBD1Q96JS3 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 AC136621.1-201ENST00000624017 2304 ntBASIC18.6■□□□□ 0.57
PGBD1Q96JS3 SSR4P1-203ENST00000599569 2260 ntBASIC18.6■□□□□ 0.57
PGBD1Q96JS3 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PGBD1Q96JS3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms