Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 AL078644.1-201ENST00000609881 752 ntBASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 AC116407.3-201ENST00000623905 1129 ntBASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 GFAP-225ENST00000638281 2099 ntTSL 5 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
CHAMP1Q96JM3 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 LINC00552-201ENST00000625151 2579 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC011477.6-201ENST00000604980 1927 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC099063.4-201ENST00000641099 1602 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AL590627.1-203ENST00000421194 1026 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AF186996.4-201ENST00000467186 377 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC018845.2-201ENST00000568326 409 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 MIR3909-201ENST00000579518 119 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AL671883.3-201ENST00000603274 991 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 AC117489.1-201ENST00000625169 3217 ntBASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CHAMP1Q96JM3 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC18.6■□□□□ 0.57
CHAMP1Q96JM3 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms