Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 TP73-AS1-207ENST00000624167 988 ntBASIC14.04□□□□□ -0.16
CPNE2Q96FN4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CPNE2Q96FN4 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.03□□□□□ -0.16
CPNE2Q96FN4 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 HAUS4P1-201ENST00000406739 1145 ntBASIC14.03□□□□□ -0.16
CPNE2Q96FN4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 AC093909.1-201ENST00000504731 1122 ntBASIC14.03□□□□□ -0.16
CPNE2Q96FN4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 AP002469.2-201ENST00000531724 424 ntBASIC14.03□□□□□ -0.16
CPNE2Q96FN4 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 AC112504.1-201ENST00000623415 1841 ntBASIC14.03□□□□□ -0.16
CPNE2Q96FN4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CPNE2Q96FN4 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CPNE2Q96FN4 AP002414.3-201ENST00000589352 1468 ntBASIC14.02□□□□□ -0.16
CPNE2Q96FN4 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 AC108751.1-201ENST00000490852 363 ntBASIC14.02□□□□□ -0.17
CPNE2Q96FN4 AC109635.5-201ENST00000533593 962 ntBASIC14.02□□□□□ -0.17
CPNE2Q96FN4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 AC010491.1-201ENST00000563101 2797 ntBASIC14.02□□□□□ -0.17
CPNE2Q96FN4 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CPNE2Q96FN4 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE2Q96FN4 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CPNE2Q96FN4 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CPNE2Q96FN4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms