Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 INE1-201ENST00000456273 945 ntBASIC17.34■□□□□ 0.37
PGBD4Q96DM1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 GIMAP3P-201ENST00000495150 836 ntBASIC17.34■□□□□ 0.37
PGBD4Q96DM1 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 RARRES2P5-201ENST00000564013 466 ntBASIC17.34■□□□□ 0.37
PGBD4Q96DM1 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PGBD4Q96DM1 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC17.33■□□□□ 0.37
PGBD4Q96DM1 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 AZGP1P1-201ENST00000411909 902 ntBASIC17.33■□□□□ 0.36
PGBD4Q96DM1 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 AC104596.2-201ENST00000512793 793 ntBASIC17.33■□□□□ 0.36
PGBD4Q96DM1 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 WASH4P-201ENST00000564273 1246 ntBASIC17.33■□□□□ 0.36
PGBD4Q96DM1 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PGBD4Q96DM1 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 AP001282.1-201ENST00000531301 1499 ntBASIC17.32■□□□□ 0.36
PGBD4Q96DM1 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 BNIP3P1-202ENST00000550043 1585 ntBASIC17.32■□□□□ 0.36
PGBD4Q96DM1 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PGBD4Q96DM1 ZBTB45P2-201ENST00000452245 1531 ntBASIC17.31■□□□□ 0.36
PGBD4Q96DM1 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
PGBD4Q96DM1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms