Protein–RNA interactions for Protein: Q92854

SEMA4D, Semaphorin-4D, humanhuman

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4DQ92854 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 AL162727.3-201ENST00000635661 2787 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 KRT8P12-202ENST00000472924 1397 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 AL080243.2-201ENST00000418783 582 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 ELP6-209ENST00000446787 894 ntTSL 3 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 PHKG1P2-201ENST00000457537 863 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 AC025678.2-201ENST00000562061 970 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 AL450472.2-201ENST00000603663 1156 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 AC097359.3-201ENST00000603982 1210 ntBASIC17.2■□□□□ 0.34
SEMA4DQ92854 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SEMA4DQ92854 ACE-204ENST00000428043 5120 ntTSL 2 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SEMA4DQ92854 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 RPS19-201ENST00000221975 500 ntTSL 3 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 CNN2P2-201ENST00000443536 909 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 CNN2P3-201ENST00000450201 906 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 HNRNPUP1-201ENST00000554987 333 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 AC015911.4-201ENST00000588022 1070 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 AL589739.1-201ENST00000607720 493 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 SPDYE12P-201ENST00000618416 771 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 AL136317.3-201ENST00000618497 906 ntBASIC17.19■□□□□ 0.34
SEMA4DQ92854 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SEMA4DQ92854 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SEMA4DQ92854 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 AC092127.1-201ENST00000567093 3455 ntBASIC17.18■□□□□ 0.34
SEMA4DQ92854 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 DKFZP434H168-201ENST00000567381 1905 ntBASIC17.18■□□□□ 0.34
SEMA4DQ92854 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 NME4-207ENST00000450036 985 ntTSL 3 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 SPIB-207ENST00000597855 564 ntTSL 4 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
SEMA4DQ92854 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
SEMA4DQ92854 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 185.4 ms