Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 AC093028.1-201ENST00000622998 982 ntBASIC16.52■□□□□ 0.24
SCG3Q8WXD2 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.52■□□□□ 0.24
SCG3Q8WXD2 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 AC067930.6-201ENST00000623257 4947 ntBASIC16.52■□□□□ 0.23
SCG3Q8WXD2 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
SCG3Q8WXD2 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 HMGA1P7-201ENST00000406908 502 ntBASIC16.51■□□□□ 0.23
SCG3Q8WXD2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 AL592309.1-201ENST00000443127 649 ntBASIC16.51■□□□□ 0.23
SCG3Q8WXD2 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 LINC00628-201ENST00000628516 1289 ntBASIC16.51■□□□□ 0.23
SCG3Q8WXD2 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.51■□□□□ 0.23
SCG3Q8WXD2 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 VMO1-203ENST00000416307 712 ntTSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.5■□□□□ 0.23
SCG3Q8WXD2 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms