Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 AL049840.4-201ENST00000602422 811 ntBASIC14.84□□□□□ -0.03
CT55Q8WUE5 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 WNT11-204ENST00000621122 789 ntTSL 5 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
CT55Q8WUE5 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CT55Q8WUE5 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
CT55Q8WUE5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
CT55Q8WUE5 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
CT55Q8WUE5 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
CT55Q8WUE5 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CT55Q8WUE5 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.83□□□□□ -0.03
CT55Q8WUE5 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC14.83□□□□□ -0.03
CT55Q8WUE5 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
CT55Q8WUE5 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC14.83□□□□□ -0.03
CT55Q8WUE5 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.03
CT55Q8WUE5 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.03
CT55Q8WUE5 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
CT55Q8WUE5 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC14.83□□□□□ -0.03
CT55Q8WUE5 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 SOCS2P1-201ENST00000417727 557 ntBASIC14.83□□□□□ -0.04
CT55Q8WUE5 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 VDAC1P7-201ENST00000462417 847 ntBASIC14.83□□□□□ -0.04
CT55Q8WUE5 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AC124283.3-201ENST00000570869 594 ntBASIC14.83□□□□□ -0.04
CT55Q8WUE5 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC14.83□□□□□ -0.04
CT55Q8WUE5 PFAS-212ENST00000625942 396 ntTSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AL033527.4-201ENST00000641026 673 ntBASIC14.83□□□□□ -0.04
CT55Q8WUE5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.83□□□□□ -0.04
CT55Q8WUE5 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
CT55Q8WUE5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 PDIA3P1-201ENST00000471856 1510 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC011676.5-201ENST00000624864 2660 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 BNIP3P42-201ENST00000454982 569 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 RPL13AP25-201ENST00000484130 612 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC120045.2-201ENST00000567334 178 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 BNIP3P29-201ENST00000598302 571 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC011447.5-201ENST00000616168 564 ntBASIC14.82□□□□□ -0.04
CT55Q8WUE5 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
CT55Q8WUE5 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
CT55Q8WUE5 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms