Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 PKIG-203ENST00000372887 769 ntTSL 3 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHD5Q8TDI0 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 INGX-202ENST00000489074 768 ntBASIC16.02■□□□□ 0.15
CHD5Q8TDI0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC16.02■□□□□ 0.15
CHD5Q8TDI0 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 AC104457.1-201ENST00000401024 814 ntBASIC16.01■□□□□ 0.15
CHD5Q8TDI0 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 AL512638.1-201ENST00000457493 794 ntBASIC16.01■□□□□ 0.15
CHD5Q8TDI0 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CHD5Q8TDI0 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
CHD5Q8TDI0 AC092127.1-201ENST00000567093 3455 ntBASIC16■□□□□ 0.15
CHD5Q8TDI0 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16■□□□□ 0.15
CHD5Q8TDI0 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
CHD5Q8TDI0 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CHD5Q8TDI0 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD5Q8TDI0 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD5Q8TDI0 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CHD5Q8TDI0 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16■□□□□ 0.15
CHD5Q8TDI0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16■□□□□ 0.15
CHD5Q8TDI0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16■□□□□ 0.15
CHD5Q8TDI0 DGCR5-201ENST00000399539 862 ntBASIC16■□□□□ 0.15
CHD5Q8TDI0 RN7SL692P-201ENST00000464677 288 ntBASIC16■□□□□ 0.15
CHD5Q8TDI0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16■□□□□ 0.15
CHD5Q8TDI0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC16■□□□□ 0.15
CHD5Q8TDI0 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16■□□□□ 0.15
CHD5Q8TDI0 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16■□□□□ 0.15
CHD5Q8TDI0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16■□□□□ 0.15
CHD5Q8TDI0 AL049840.4-201ENST00000602422 811 ntBASIC16■□□□□ 0.15
CHD5Q8TDI0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16■□□□□ 0.15
CHD5Q8TDI0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
CHD5Q8TDI0 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms