Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 METTL26-204ENST00000397665 558 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 KRT18P34-201ENST00000488218 1270 ntBASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 RARRES2P9-201ENST00000565168 469 ntBASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 AC018529.1-201ENST00000613063 361 ntBASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 AP3S2-216ENST00000617003 1561 ntBASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC33Q8N5R6 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 MTHFR-217ENST00000641820 1569 ntBASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 AC142381.1-201ENST00000426099 345 ntBASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 POU5F1P6-201ENST00000466990 990 ntBASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 AC005225.4-201ENST00000557330 545 ntBASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 AC073592.8-201ENST00000624126 511 ntBASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 AC063926.2-201ENST00000623766 1308 ntBASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC33Q8N5R6 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 AC007950.2-201ENST00000615045 2347 ntBASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 AC004890.2-204ENST00000481968 304 ntBASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC33Q8N5R6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms