Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 AC092384.3-202ENST00000564646 2873 ntBASIC16.43■□□□□ 0.22
CASC4Q6P4E1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 KRT18P2-201ENST00000447938 1258 ntBASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 WASH6P-202ENST00000359512 1437 ntBASIC16.43■□□□□ 0.22
CASC4Q6P4E1 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 PMS2P7-201ENST00000506558 1336 ntBASIC16.43■□□□□ 0.22
CASC4Q6P4E1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CASC4Q6P4E1 AC008677.1-201ENST00000519230 1561 ntBASIC16.43■□□□□ 0.22
CASC4Q6P4E1 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 PRYP6-201ENST00000514804 343 ntBASIC16.42■□□□□ 0.22
CASC4Q6P4E1 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 KLK8-205ENST00000593490 267 ntTSL 3 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 AC068137.2-201ENST00000605408 478 ntBASIC16.42■□□□□ 0.22
CASC4Q6P4E1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 AL161645.1-201ENST00000622716 1255 ntBASIC16.42■□□□□ 0.22
CASC4Q6P4E1 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 AC073347.1-201ENST00000421633 2643 ntBASIC16.42■□□□□ 0.22
CASC4Q6P4E1 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CASC4Q6P4E1 OR2I1P-209ENST00000641730 5365 ntBASIC16.41■□□□□ 0.22
CASC4Q6P4E1 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 AL589702.1-201ENST00000641229 1509 ntBASIC16.41■□□□□ 0.22
CASC4Q6P4E1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 IL9RP2-201ENST00000423948 1312 ntBASIC16.41■□□□□ 0.22
CASC4Q6P4E1 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CASC4Q6P4E1 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms