Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AL031731.1-201ENST00000642131 2094 ntBASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 IL9-201ENST00000274520 591 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AC078991.1-201ENST00000437297 610 ntBASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 KRT18P25-201ENST00000508931 1278 ntBASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AC005740.2-201ENST00000511085 419 ntBASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AC026410.3-201ENST00000514280 936 ntBASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 AC005622.1-201ENST00000636801 1703 ntBASIC13.53□□□□□ -0.24
HIST2H2BCQ6DN03 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
HIST2H2BCQ6DN03 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AL512430.1-201ENST00000392575 860 ntBASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AC019193.1-201ENST00000506678 823 ntBASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 MIR6842-201ENST00000612539 65 ntBASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 FAM69C-202ENST00000400291 1329 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 AC016396.2-201ENST00000562575 1417 ntBASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HIST2H2BCQ6DN03 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 AC004408.2-201ENST00000623613 2777 ntBASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HIST2H2BCQ6DN03 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms