Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 CSH2-202ENST00000345366 598 ntTSL 5 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 ACTBP8-201ENST00000403258 1108 ntBASIC19.86■□□□□ 0.77
RC3H1Q5TC82 MIR663B-201ENST00000408361 115 ntBASIC19.86■□□□□ 0.77
RC3H1Q5TC82 FNTAP2-201ENST00000430308 634 ntBASIC19.86■□□□□ 0.77
RC3H1Q5TC82 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 AC005077.2-201ENST00000449786 690 ntBASIC19.86■□□□□ 0.77
RC3H1Q5TC82 REEP1-202ENST00000453231 940 ntTSL 2 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 AL590640.2-201ENST00000457038 527 ntBASIC19.86■□□□□ 0.77
RC3H1Q5TC82 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 AL096828.3-201ENST00000615354 462 ntBASIC19.86■□□□□ 0.77
RC3H1Q5TC82 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC19.86■□□□□ 0.77
RC3H1Q5TC82 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 ADM-202ENST00000524948 584 ntTSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 RN7SL48P-201ENST00000579283 293 ntBASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC020914.3-201ENST00000594712 304 ntBASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC015967.2-201ENST00000624092 234 ntBASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AC006435.4-201ENST00000625037 234 ntBASIC19.85■□□□□ 0.77
RC3H1Q5TC82 AL356737.1-201ENST00000634391 234 ntBASIC19.85■□□□□ 0.77
RC3H1Q5TC82 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RC3H1Q5TC82 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AL662890.1-201ENST00000396818 632 ntBASIC19.84■□□□□ 0.77
RC3H1Q5TC82 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 RAC2-202ENST00000401529 569 ntTSL 4 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AC079328.1-201ENST00000560358 952 ntBASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AC008805.2-201ENST00000590069 435 ntTSL 5 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RC3H1Q5TC82 AC018735.1-201ENST00000437208 1502 ntBASIC19.84■□□□□ 0.77
RC3H1Q5TC82 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms