Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AC108751.1-201ENST00000490852 363 ntBASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AC093909.1-201ENST00000504731 1122 ntBASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 CICP14-201ENST00000629111 2732 ntBASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC12.37□□□□□ -0.43
HIST1H1AQ02539 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AP002414.2-201ENST00000591780 3365 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SCUBE1-202ENST00000360835 9808 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 REXO1L8P-201ENST00000604378 1897 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AL450487.1-201ENST00000426799 995 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 FAAHP1-202ENST00000446499 1238 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 CXCL1P1-201ENST00000502804 216 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 MTRF1LP2-201ENST00000506027 1122 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 MMP17-203ENST00000535004 719 ntTSL 3 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 CALM3-211ENST00000598871 561 ntTSL 4 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 PRKN-208ENST00000610470 531 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 PRKN-209ENST00000612485 225 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AL031008.1-201ENST00000619963 541 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 SNX18-202ENST00000343017 3140 ntBASIC12.36□□□□□ -0.43
HIST1H1AQ02539 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
HIST1H1AQ02539 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms