Protein–RNA interactions for Protein: P61088

UBE2N, Ubiquitin-conjugating enzyme E2 N, humanhuman

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2NP61088 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2NP61088 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2NP61088 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2NP61088 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.14□□□□□ -0.15
UBE2NP61088 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.14□□□□□ -0.15
UBE2NP61088 RN7SL828P-201ENST00000607615 303 ntBASIC14.14□□□□□ -0.15
UBE2NP61088 AL589739.1-201ENST00000607720 493 ntBASIC14.14□□□□□ -0.15
UBE2NP61088 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
UBE2NP61088 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 ST3GAL2-201ENST00000342907 4450 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.14□□□□□ -0.15
UBE2NP61088 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
UBE2NP61088 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
UBE2NP61088 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
UBE2NP61088 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
UBE2NP61088 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
UBE2NP61088 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 HAUS4P1-201ENST00000406739 1145 ntBASIC14.13□□□□□ -0.15
UBE2NP61088 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.13□□□□□ -0.15
UBE2NP61088 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 AC243562.2-201ENST00000561247 970 ntBASIC14.13□□□□□ -0.15
UBE2NP61088 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 AC073592.8-201ENST00000624126 511 ntBASIC14.13□□□□□ -0.15
UBE2NP61088 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.13□□□□□ -0.15
UBE2NP61088 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC14.13□□□□□ -0.15
UBE2NP61088 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
UBE2NP61088 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms