Protein–RNA interactions for Protein: P60953

CDC42, Cell division control protein 42 homolog, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42P60953 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.74□□□□□ -0.05
CDC42P60953 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
CDC42P60953 AC105250.1-201ENST00000509378 2057 ntBASIC14.73□□□□□ -0.05
CDC42P60953 POR-201ENST00000394893 2532 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 IER3-202ENST00000376377 1350 ntBASIC14.73□□□□□ -0.05
CDC42P60953 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 AC007292.2-201ENST00000593524 1812 ntBASIC14.73□□□□□ -0.05
CDC42P60953 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 CICP24-201ENST00000605464 2705 ntBASIC14.73□□□□□ -0.05
CDC42P60953 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 AC006504.4-201ENST00000592118 1568 ntBASIC14.73□□□□□ -0.05
CDC42P60953 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42P60953 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42P60953 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42P60953 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 ELK2BP-201ENST00000415014 1224 ntBASIC14.73□□□□□ -0.05
CDC42P60953 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.73□□□□□ -0.05
CDC42P60953 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42P60953 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.73□□□□□ -0.05
CDC42P60953 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC14.73□□□□□ -0.05
CDC42P60953 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.73□□□□□ -0.05
CDC42P60953 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 METTL23-204ENST00000586752 904 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 AC069148.1-201ENST00000608741 768 ntBASIC14.73□□□□□ -0.05
CDC42P60953 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CDC42P60953 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CDC42P60953 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.73□□□□□ -0.05
CDC42P60953 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
CDC42P60953 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42P60953 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC42P60953 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.72□□□□□ -0.05
CDC42P60953 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 AC006557.2-201ENST00000592985 1240 ntBASIC14.72□□□□□ -0.05
CDC42P60953 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC14.72□□□□□ -0.05
CDC42P60953 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
CDC42P60953 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42P60953 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.72□□□□□ -0.05
CDC42P60953 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CDC42P60953 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.72□□□□□ -0.05
CDC42P60953 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms