Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 AC009078.2-202ENST00000463353 338 ntBASIC15.01□□□□□ -0.01
CDH12P55289 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC15.01□□□□□ -0.01
CDH12P55289 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 CD63-210ENST00000550776 870 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 AC096734.2-201ENST00000562054 433 ntBASIC15.01□□□□□ -0.01
CDH12P55289 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.01□□□□□ -0.01
CDH12P55289 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.01□□□□□ -0.01
CDH12P55289 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.01□□□□□ -0.01
CDH12P55289 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CDH12P55289 TMBIM7P-203ENST00000641617 1718 ntBASIC15□□□□□ -0.01
CDH12P55289 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
CDH12P55289 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15□□□□□ -0.01
CDH12P55289 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15□□□□□ -0.01
CDH12P55289 BID-213ENST00000615414 2236 ntTSL 5 BASIC15□□□□□ -0.01
CDH12P55289 RELA-227ENST00000615805 2236 ntTSL 5 BASIC15□□□□□ -0.01
CDH12P55289 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15□□□□□ -0.01
CDH12P55289 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CDH12P55289 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC15□□□□□ -0.01
CDH12P55289 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC15□□□□□ -0.01
CDH12P55289 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CDH12P55289 RHOQP3-201ENST00000437982 621 ntBASIC15□□□□□ -0.01
CDH12P55289 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 CD63-204ENST00000546939 779 ntTSL 3 BASIC15□□□□□ -0.01
CDH12P55289 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC15□□□□□ -0.01
CDH12P55289 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC15□□□□□ -0.01
CDH12P55289 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15□□□□□ -0.01
CDH12P55289 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
CDH12P55289 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC15□□□□□ -0.01
CDH12P55289 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CDH12P55289 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
CDH12P55289 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
CDH12P55289 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH12P55289 PCDHA3-202ENST00000532566 4594 ntBASIC14.99□□□□□ -0.01
CDH12P55289 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC14.99□□□□□ -0.01
CDH12P55289 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.99□□□□□ -0.01
CDH12P55289 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 Z83851.2-201ENST00000609564 659 ntBASIC14.99□□□□□ -0.01
CDH12P55289 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH12P55289 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC14.99□□□□□ -0.01
CDH12P55289 AC006486.2-201ENST00000624246 2199 ntBASIC14.99□□□□□ -0.01
CDH12P55289 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.99□□□□□ -0.01
CDH12P55289 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CDH12P55289 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
CDH12P55289 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms