Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC11.75□□□□□ -0.53
APOC4P55056 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC4P55056 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC11.74□□□□□ -0.53
APOC4P55056 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
APOC4P55056 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
APOC4P55056 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC11.74□□□□□ -0.53
APOC4P55056 AC093004.1-201ENST00000508850 424 ntBASIC11.74□□□□□ -0.53
APOC4P55056 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC11.74□□□□□ -0.53
APOC4P55056 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 AC009407.1-201ENST00000568958 598 ntBASIC11.74□□□□□ -0.53
APOC4P55056 AC008738.7-201ENST00000609744 511 ntBASIC11.74□□□□□ -0.53
APOC4P55056 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC4P55056 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 KRT8P37-201ENST00000451609 1420 ntBASIC11.74□□□□□ -0.53
APOC4P55056 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC4P55056 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 AL136982.4-201ENST00000437689 1740 ntBASIC11.74□□□□□ -0.53
APOC4P55056 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC11.74□□□□□ -0.53
APOC4P55056 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC11.74□□□□□ -0.53
APOC4P55056 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC11.74□□□□□ -0.53
APOC4P55056 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 AC006449.6-201ENST00000612330 2296 ntBASIC11.74□□□□□ -0.53
APOC4P55056 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
APOC4P55056 AC022211.2-201ENST00000585075 2527 ntBASIC11.74□□□□□ -0.53
APOC4P55056 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 CALY-202ENST00000368555 783 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 MIR648-201ENST00000385046 94 ntBASIC11.73□□□□□ -0.53
APOC4P55056 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 DFFBP1-201ENST00000433250 979 ntBASIC11.73□□□□□ -0.53
APOC4P55056 AL353779.1-201ENST00000434793 351 ntBASIC11.73□□□□□ -0.53
APOC4P55056 AC114501.2-201ENST00000439631 535 ntBASIC11.73□□□□□ -0.53
APOC4P55056 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 CRB3P1-201ENST00000449338 276 ntBASIC11.73□□□□□ -0.53
APOC4P55056 PTK7-212ENST00000476760 902 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 DOC2GP-202ENST00000514950 1163 ntBASIC11.73□□□□□ -0.53
APOC4P55056 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 AC044860.1-202ENST00000559481 777 ntBASIC11.73□□□□□ -0.53
APOC4P55056 AC104794.3-201ENST00000566840 1248 ntBASIC11.73□□□□□ -0.53
APOC4P55056 ALOX12P2-203ENST00000570921 1945 ntBASIC11.73□□□□□ -0.53
APOC4P55056 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.73□□□□□ -0.53
APOC4P55056 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC11.73□□□□□ -0.53
APOC4P55056 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
APOC4P55056 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC11.73□□□□□ -0.53
APOC4P55056 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC11.73□□□□□ -0.53
APOC4P55056 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC11.73□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms