Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.26□□□□□ -0.13
LHX2P50458 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LHX2P50458 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC14.26□□□□□ -0.13
LHX2P50458 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 SLC7A15P-201ENST00000424028 1363 ntBASIC14.26□□□□□ -0.13
LHX2P50458 AL391825.1-201ENST00000457671 1364 ntBASIC14.26□□□□□ -0.13
LHX2P50458 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX2P50458 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX2P50458 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC14.26□□□□□ -0.13
LHX2P50458 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC14.26□□□□□ -0.13
LHX2P50458 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 AC027307.3-201ENST00000594262 1100 ntBASIC14.26□□□□□ -0.13
LHX2P50458 AC097359.3-201ENST00000603982 1210 ntBASIC14.26□□□□□ -0.13
LHX2P50458 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.26□□□□□ -0.13
LHX2P50458 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 AC018892.3-201ENST00000623986 2499 ntBASIC14.26□□□□□ -0.13
LHX2P50458 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
LHX2P50458 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LHX2P50458 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LHX2P50458 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LHX2P50458 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.26□□□□□ -0.13
LHX2P50458 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LHX2P50458 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
LHX2P50458 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
LHX2P50458 CDC14C-201ENST00000428251 1719 ntBASIC14.25□□□□□ -0.13
LHX2P50458 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX2P50458 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 AC087499.6-201ENST00000411576 835 ntBASIC14.25□□□□□ -0.13
LHX2P50458 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 MEP1AP4-201ENST00000423244 1087 ntBASIC14.25□□□□□ -0.13
LHX2P50458 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 MEIS3P1-201ENST00000495167 958 ntBASIC14.25□□□□□ -0.13
LHX2P50458 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC14.25□□□□□ -0.13
LHX2P50458 AC055876.2-201ENST00000531834 546 ntBASIC14.25□□□□□ -0.13
LHX2P50458 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 TP53TG3HP-202ENST00000569755 579 ntBASIC14.25□□□□□ -0.13
LHX2P50458 AC140912.1-201ENST00000577171 1054 ntBASIC14.25□□□□□ -0.13
LHX2P50458 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LHX2P50458 AC025048.6-201ENST00000634326 1161 ntBASIC14.25□□□□□ -0.13
LHX2P50458 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LHX2P50458 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 BLK-205ENST00000529894 2017 ntTSL 5 BASIC14.25□□□□□ -0.13
LHX2P50458 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.25□□□□□ -0.13
LHX2P50458 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
LHX2P50458 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
LHX2P50458 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LHX2P50458 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms