Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRIM2P49643 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PRIM2P49643 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PRIM2P49643 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC15.36■□□□□ 0.05
PRIM2P49643 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRIM2P49643 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.36■□□□□ 0.05
PRIM2P49643 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.35■□□□□ 0.05
PRIM2P49643 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PRIM2P49643 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PRIM2P49643 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.35■□□□□ 0.05
PRIM2P49643 KRT18P2-201ENST00000447938 1258 ntBASIC15.35■□□□□ 0.05
PRIM2P49643 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.35■□□□□ 0.05
PRIM2P49643 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC15.35■□□□□ 0.05
PRIM2P49643 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC15.35■□□□□ 0.05
PRIM2P49643 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC15.35■□□□□ 0.05
PRIM2P49643 AC106730.1-201ENST00000566722 1090 ntBASIC15.35■□□□□ 0.05
PRIM2P49643 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC15.35■□□□□ 0.05
PRIM2P49643 AC068137.2-201ENST00000605408 478 ntBASIC15.35■□□□□ 0.05
PRIM2P49643 AC027601.4-201ENST00000611259 610 ntBASIC15.35■□□□□ 0.05
PRIM2P49643 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PRIM2P49643 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.35■□□□□ 0.05
PRIM2P49643 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRIM2P49643 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PRIM2P49643 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PRIM2P49643 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 MED15P5-201ENST00000423150 992 ntBASIC15.34■□□□□ 0.05
PRIM2P49643 HNRNPA1P28-201ENST00000424481 961 ntBASIC15.34■□□□□ 0.05
PRIM2P49643 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 KRT18P3-201ENST00000451602 1288 ntBASIC15.34■□□□□ 0.05
PRIM2P49643 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
PRIM2P49643 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC15.34■□□□□ 0.05
PRIM2P49643 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 AL078644.1-201ENST00000609881 752 ntBASIC15.34■□□□□ 0.05
PRIM2P49643 AL161645.1-201ENST00000622716 1255 ntBASIC15.34■□□□□ 0.05
PRIM2P49643 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC15.34■□□□□ 0.05
PRIM2P49643 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PRIM2P49643 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PRIM2P49643 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRIM2P49643 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.34■□□□□ 0.05
PRIM2P49643 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms