Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 FER1L4-210ENST00000615531 5998 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
GABRA4P48169 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
GABRA4P48169 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC15.14■□□□□ 0.01
GABRA4P48169 AC018892.3-201ENST00000623986 2499 ntBASIC15.14■□□□□ 0.01
GABRA4P48169 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.13■□□□□ 0.01
GABRA4P48169 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.13■□□□□ 0.01
GABRA4P48169 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
GABRA4P48169 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.13■□□□□ 0.01
GABRA4P48169 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
GABRA4P48169 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 KRT18P64-201ENST00000434946 1219 ntBASIC15.13■□□□□ 0.01
GABRA4P48169 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 AL596325.1-201ENST00000563991 1082 ntBASIC15.13■□□□□ 0.01
GABRA4P48169 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
GABRA4P48169 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 SRP9-204ENST00000619790 377 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC15.13■□□□□ 0.01
GABRA4P48169 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
GABRA4P48169 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
GABRA4P48169 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 AC087499.6-201ENST00000411576 835 ntBASIC15.12■□□□□ 0.01
GABRA4P48169 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 MEP1AP4-201ENST00000423244 1087 ntBASIC15.12■□□□□ 0.01
GABRA4P48169 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.12■□□□□ 0.01
GABRA4P48169 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC15.12■□□□□ 0.01
GABRA4P48169 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC15.12■□□□□ 0.01
GABRA4P48169 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.12■□□□□ 0.01
GABRA4P48169 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.12■□□□□ 0.01
GABRA4P48169 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC15.12■□□□□ 0.01
GABRA4P48169 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.12■□□□□ 0.01
GABRA4P48169 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
GABRA4P48169 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
GABRA4P48169 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
GABRA4P48169 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms